Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.97■□□□□ 0.95
RPS4Y1P22090 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.97■□□□□ 0.95
RPS4Y1P22090 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.97■□□□□ 0.95
RPS4Y1P22090 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4Y1P22090 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4Y1P22090 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.96■□□□□ 0.95
RPS4Y1P22090 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4Y1P22090 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.96■□□□□ 0.95
RPS4Y1P22090 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.96■□□□□ 0.95
RPS4Y1P22090 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPS4Y1P22090 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.96■□□□□ 0.95
RPS4Y1P22090 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RPS4Y1P22090 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
RPS4Y1P22090 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS4Y1P22090 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4Y1P22090 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4Y1P22090 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4Y1P22090 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS4Y1P22090 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPS4Y1P22090 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.95■□□□□ 0.94
RPS4Y1P22090 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.94■□□□□ 0.94
RPS4Y1P22090 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y1P22090 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.94■□□□□ 0.94
RPS4Y1P22090 AC068473.5-201ENST00000616428 2072 ntBASIC20.94■□□□□ 0.94
RPS4Y1P22090 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RPS4Y1P22090 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y1P22090 AC137630.3-201ENST00000607245 391 ntBASIC20.94■□□□□ 0.94
RPS4Y1P22090 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RPS4Y1P22090 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y1P22090 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y1P22090 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RPS4Y1P22090 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y1P22090 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y1P22090 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y1P22090 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 AL031848.2-201ENST00000607670 837 ntBASIC20.93■□□□□ 0.94
RPS4Y1P22090 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y1P22090 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RPS4Y1P22090 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RPS4Y1P22090 SNX5-217ENST00000606557 1087 ntBASIC20.92■□□□□ 0.94
RPS4Y1P22090 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y1P22090 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y1P22090 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y1P22090 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y1P22090 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.92■□□□□ 0.94
RPS4Y1P22090 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RPS4Y1P22090 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
RPS4Y1P22090 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RPS4Y1P22090 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS4Y1P22090 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.91■□□□□ 0.94
RPS4Y1P22090 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RPS4Y1P22090 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS4Y1P22090 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y1P22090 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y1P22090 AC012676.1-201ENST00000574705 1949 ntBASIC20.9■□□□□ 0.94
RPS4Y1P22090 DUSP8P3-201ENST00000399571 1760 ntBASIC20.9■□□□□ 0.94
RPS4Y1P22090 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y1P22090 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y1P22090 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.9■□□□□ 0.94
RPS4Y1P22090 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS4Y1P22090 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.89■□□□□ 0.94
RPS4Y1P22090 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPS4Y1P22090 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPS4Y1P22090 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RPS4Y1P22090 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y1P22090 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y1P22090 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y1P22090 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y1P22090 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RPS4Y1P22090 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
RPS4Y1P22090 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y1P22090 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y1P22090 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
RPS4Y1P22090 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y1P22090 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y1P22090 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS4Y1P22090 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms