Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb9P20615 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb9P20615 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb9P20615 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb9P20615 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.67■□□□□ 0.74
Hoxb9P20615 Gm9959-201ENSMUST00000068277 390 ntBASIC19.67■□□□□ 0.74
Hoxb9P20615 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb9P20615 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb9P20615 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.66■□□□□ 0.74
Hoxb9P20615 Gm7143-201ENSMUST00000222811 859 ntBASIC19.66■□□□□ 0.74
Hoxb9P20615 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Hoxb9P20615 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb9P20615 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Hoxb9P20615 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.65■□□□□ 0.74
Hoxb9P20615 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.65■□□□□ 0.74
Hoxb9P20615 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.65■□□□□ 0.74
Hoxb9P20615 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxb9P20615 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
Hoxb9P20615 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Hoxb9P20615 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb9P20615 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb9P20615 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb9P20615 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hoxb9P20615 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Hoxb9P20615 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Hoxb9P20615 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb9P20615 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb9P20615 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb9P20615 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb9P20615 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb9P20615 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb9P20615 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb9P20615 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb9P20615 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb9P20615 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb9P20615 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb9P20615 Gm7417-201ENSMUST00000192950 473 ntBASIC19.62■□□□□ 0.73
Hoxb9P20615 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb9P20615 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.62■□□□□ 0.73
Hoxb9P20615 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hoxb9P20615 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb9P20615 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Hoxb9P20615 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb9P20615 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hoxb9P20615 Etf1-202ENSMUST00000180351 108 ntBASIC19.61■□□□□ 0.73
Hoxb9P20615 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb9P20615 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb9P20615 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Hoxb9P20615 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Hoxb9P20615 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxb9P20615 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb9P20615 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb9P20615 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxb9P20615 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb9P20615 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.6■□□□□ 0.73
Hoxb9P20615 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb9P20615 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb9P20615 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb9P20615 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb9P20615 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.59■□□□□ 0.73
Hoxb9P20615 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxb9P20615 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxb9P20615 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxb9P20615 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxb9P20615 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxb9P20615 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxb9P20615 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxb9P20615 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb9P20615 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms