Protein–RNA interactions for Protein: P09079

Hoxb5, Homeobox protein Hox-B5, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb5P09079 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxb5P09079 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hoxb5P09079 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxb5P09079 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.12■□□□□ 0.33
Hoxb5P09079 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Hoxb5P09079 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.12■□□□□ 0.33
Hoxb5P09079 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hoxb5P09079 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hoxb5P09079 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Gm7432-201ENSMUST00000210343 879 ntBASIC17.11■□□□□ 0.33
Hoxb5P09079 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hoxb5P09079 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hoxb5P09079 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.1■□□□□ 0.33
Hoxb5P09079 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb5P09079 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxb5P09079 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hoxb5P09079 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb5P09079 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hoxb5P09079 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hoxb5P09079 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb5P09079 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb5P09079 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxb5P09079 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb5P09079 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.09■□□□□ 0.33
Hoxb5P09079 Gm11599-201ENSMUST00000118720 878 ntBASIC17.09■□□□□ 0.33
Hoxb5P09079 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.09■□□□□ 0.33
Hoxb5P09079 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.09■□□□□ 0.33
Hoxb5P09079 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hoxb5P09079 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxb5P09079 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hoxb5P09079 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb5P09079 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.08■□□□□ 0.32
Hoxb5P09079 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.08■□□□□ 0.32
Hoxb5P09079 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hoxb5P09079 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.08■□□□□ 0.32
Hoxb5P09079 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.08■□□□□ 0.32
Hoxb5P09079 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.08■□□□□ 0.32
Hoxb5P09079 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb5P09079 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hoxb5P09079 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hoxb5P09079 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hoxb5P09079 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb5P09079 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb5P09079 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb5P09079 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb5P09079 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb5P09079 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
Hoxb5P09079 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hoxb5P09079 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb5P09079 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.07■□□□□ 0.32
Hoxb5P09079 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxb5P09079 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hoxb5P09079 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.06■□□□□ 0.32
Hoxb5P09079 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Hoxb5P09079 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hoxb5P09079 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hoxb5P09079 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Hoxb5P09079 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb5P09079 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb5P09079 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb5P09079 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Hoxb5P09079 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb5P09079 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb5P09079 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.05■□□□□ 0.32
Hoxb5P09079 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hoxb5P09079 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hoxb5P09079 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hoxb5P09079 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hoxb5P09079 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms