Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd74P04441 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd74P04441 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd74P04441 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd74P04441 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd74P04441 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.02■□□□□ 0.32
Cd74P04441 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cd74P04441 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.02■□□□□ 0.31
Cd74P04441 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cd74P04441 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd74P04441 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd74P04441 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Cd74P04441 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.01■□□□□ 0.31
Cd74P04441 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cd74P04441 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cd74P04441 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd74P04441 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd74P04441 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd74P04441 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17■□□□□ 0.31
Cd74P04441 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cd74P04441 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cd74P04441 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cd74P04441 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.99■□□□□ 0.31
Cd74P04441 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cd74P04441 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.99■□□□□ 0.31
Cd74P04441 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.99■□□□□ 0.31
Cd74P04441 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.99■□□□□ 0.31
Cd74P04441 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd74P04441 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd74P04441 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd74P04441 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd74P04441 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.98■□□□□ 0.31
Cd74P04441 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cd74P04441 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Cd74P04441 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cd74P04441 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cd74P04441 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd74P04441 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.97■□□□□ 0.31
Cd74P04441 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd74P04441 Gm22238-201ENSMUST00000175222 88 ntBASIC16.97■□□□□ 0.31
Cd74P04441 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd74P04441 Gm13241-201ENSMUST00000094493 780 ntBASIC16.97■□□□□ 0.31
Cd74P04441 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd74P04441 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd74P04441 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cd74P04441 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cd74P04441 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cd74P04441 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cd74P04441 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cd74P04441 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd74P04441 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Cd74P04441 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Cd74P04441 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd74P04441 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd74P04441 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd74P04441 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cd74P04441 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd74P04441 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd74P04441 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Cd74P04441 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cd74P04441 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.95■□□□□ 0.3
Cd74P04441 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Cd74P04441 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cd74P04441 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Cd74P04441 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.94■□□□□ 0.3
Cd74P04441 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Gm9847-201ENSMUST00000052528 599 ntBASIC16.94■□□□□ 0.3
Cd74P04441 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cd74P04441 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Cd74P04441 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms