Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CfdP03953 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CfdP03953 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CfdP03953 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CfdP03953 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.09■□□□□ 0.33
CfdP03953 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.09■□□□□ 0.33
CfdP03953 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.09■□□□□ 0.33
CfdP03953 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CfdP03953 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CfdP03953 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.08■□□□□ 0.33
CfdP03953 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CfdP03953 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CfdP03953 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.08■□□□□ 0.32
CfdP03953 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CfdP03953 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CfdP03953 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CfdP03953 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CfdP03953 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CfdP03953 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.07■□□□□ 0.32
CfdP03953 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CfdP03953 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CfdP03953 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CfdP03953 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CfdP03953 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CfdP03953 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.06■□□□□ 0.32
CfdP03953 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.06■□□□□ 0.32
CfdP03953 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.06■□□□□ 0.32
CfdP03953 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CfdP03953 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CfdP03953 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CfdP03953 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CfdP03953 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.05■□□□□ 0.32
CfdP03953 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.05■□□□□ 0.32
CfdP03953 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CfdP03953 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CfdP03953 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CfdP03953 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CfdP03953 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CfdP03953 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.03■□□□□ 0.32
CfdP03953 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
CfdP03953 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CfdP03953 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.03■□□□□ 0.32
CfdP03953 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CfdP03953 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CfdP03953 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CfdP03953 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CfdP03953 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CfdP03953 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CfdP03953 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CfdP03953 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CfdP03953 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CfdP03953 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CfdP03953 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CfdP03953 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CfdP03953 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms