Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NgfP01139 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NgfP01139 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NgfP01139 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NgfP01139 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NgfP01139 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NgfP01139 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NgfP01139 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NgfP01139 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NgfP01139 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.23■□□□□ 0.51
NgfP01139 Gm5874-201ENSMUST00000096101 508 ntBASIC18.23■□□□□ 0.51
NgfP01139 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NgfP01139 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NgfP01139 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NgfP01139 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.22■□□□□ 0.51
NgfP01139 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NgfP01139 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
NgfP01139 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NgfP01139 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NgfP01139 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.22■□□□□ 0.51
NgfP01139 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.21■□□□□ 0.51
NgfP01139 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.21■□□□□ 0.51
NgfP01139 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NgfP01139 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.2■□□□□ 0.5
NgfP01139 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NgfP01139 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NgfP01139 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.19■□□□□ 0.5
NgfP01139 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NgfP01139 Gm43060-201ENSMUST00000200621 289 ntBASIC18.19■□□□□ 0.5
NgfP01139 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
NgfP01139 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.19■□□□□ 0.5
NgfP01139 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NgfP01139 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NgfP01139 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NgfP01139 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NgfP01139 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NgfP01139 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.18■□□□□ 0.5
NgfP01139 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NgfP01139 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.18■□□□□ 0.5
NgfP01139 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NgfP01139 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.18■□□□□ 0.5
NgfP01139 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.17■□□□□ 0.5
NgfP01139 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NgfP01139 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NgfP01139 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NgfP01139 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NgfP01139 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.16■□□□□ 0.5
NgfP01139 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NgfP01139 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NgfP01139 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.16■□□□□ 0.5
NgfP01139 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
NgfP01139 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.16■□□□□ 0.5
NgfP01139 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NgfP01139 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NgfP01139 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NgfP01139 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Smad6-203ENSMUST00000179458 273 ntBASIC18.15■□□□□ 0.5
NgfP01139 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NgfP01139 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.15■□□□□ 0.5
NgfP01139 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.14■□□□□ 0.5
NgfP01139 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.14■□□□□ 0.5
NgfP01139 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.14■□□□□ 0.49
NgfP01139 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.14■□□□□ 0.49
NgfP01139 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Gm10493-201ENSMUST00000097270 612 ntBASIC18.14■□□□□ 0.49
NgfP01139 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NgfP01139 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms