Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
Ttc3O88196 Gm18284-201ENSMUST00000172604 624 ntBASIC21.7■■□□□ 1.07
Ttc3O88196 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.07
Ttc3O88196 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ttc3O88196 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc3O88196 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc3O88196 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc3O88196 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc3O88196 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ttc3O88196 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Ttc3O88196 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc3O88196 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.69■■□□□ 1.06
Ttc3O88196 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc3O88196 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc3O88196 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc3O88196 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ttc3O88196 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc3O88196 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ttc3O88196 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Ttc3O88196 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ttc3O88196 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Ttc3O88196 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.68■■□□□ 1.06
Ttc3O88196 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ttc3O88196 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ttc3O88196 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.68■■□□□ 1.06
Ttc3O88196 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ttc3O88196 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ttc3O88196 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc3O88196 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc3O88196 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.67■■□□□ 1.06
Ttc3O88196 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.67■■□□□ 1.06
Ttc3O88196 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
Ttc3O88196 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc3O88196 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc3O88196 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ttc3O88196 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ttc3O88196 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ttc3O88196 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Ttc3O88196 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Ttc3O88196 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.66■■□□□ 1.06
Ttc3O88196 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc3O88196 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Ttc3O88196 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.66■■□□□ 1.06
Ttc3O88196 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc3O88196 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc3O88196 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.66■■□□□ 1.06
Ttc3O88196 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ttc3O88196 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ttc3O88196 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.65■■□□□ 1.06
Ttc3O88196 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.65■■□□□ 1.06
Ttc3O88196 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Ttc3O88196 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc3O88196 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ttc3O88196 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ttc3O88196 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.65■■□□□ 1.06
Ttc3O88196 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc3O88196 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Ttc3O88196 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ttc3O88196 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc3O88196 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.64■■□□□ 1.05
Ttc3O88196 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc3O88196 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc3O88196 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.64■■□□□ 1.05
Ttc3O88196 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Ttc3O88196 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc3O88196 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc3O88196 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ttc3O88196 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.63■■□□□ 1.05
Ttc3O88196 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.63■■□□□ 1.05
Ttc3O88196 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc3O88196 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Ttc3O88196 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc3O88196 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.63■■□□□ 1.05
Ttc3O88196 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc3O88196 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc3O88196 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ttc3O88196 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.62■■□□□ 1.05
Ttc3O88196 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc3O88196 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.62■■□□□ 1.05
Ttc3O88196 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ttc3O88196 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc3O88196 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc3O88196 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ttc3O88196 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.61■■□□□ 1.05
Ttc3O88196 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.61■■□□□ 1.05
Ttc3O88196 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.61■■□□□ 1.05
Ttc3O88196 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.61■■□□□ 1.05
Ttc3O88196 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Ttc3O88196 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ttc3O88196 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ttc3O88196 Gm8493-201ENSMUST00000196881 489 ntBASIC21.6■■□□□ 1.05
Ttc3O88196 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.6■■□□□ 1.05
Ttc3O88196 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms