Protein–RNA interactions for Protein: E9Q8Q6

Ccdc141, Coiled-coil domain-containing 141, mousemouse

Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc141E9Q8Q6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc141E9Q8Q6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc141E9Q8Q6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc141E9Q8Q6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc141E9Q8Q6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc141E9Q8Q6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC31.47■■■□□ 2.63
Ccdc141E9Q8Q6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc141E9Q8Q6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc141E9Q8Q6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc141E9Q8Q6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Ccdc141E9Q8Q6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Gm12669-201ENSMUST00000122162 1009 ntBASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Gm11421-201ENSMUST00000122124 294 ntBASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc141E9Q8Q6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Ccdc141E9Q8Q6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc141E9Q8Q6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc141E9Q8Q6 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC31.42■■■□□ 2.62
Ccdc141E9Q8Q6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Ccdc141E9Q8Q6 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc141E9Q8Q6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Ccdc141E9Q8Q6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc141E9Q8Q6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc141E9Q8Q6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Ccdc141E9Q8Q6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC31.4■■■□□ 2.62
Ccdc141E9Q8Q6 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc141E9Q8Q6 Gm27045-201ENSMUST00000182145 1402 ntBASIC31.4■■■□□ 2.62
Ccdc141E9Q8Q6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC31.4■■■□□ 2.62
Ccdc141E9Q8Q6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc141E9Q8Q6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Ccdc141E9Q8Q6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc141E9Q8Q6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc141E9Q8Q6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc141E9Q8Q6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
Ccdc141E9Q8Q6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
Ccdc141E9Q8Q6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.38■■■□□ 2.61
Ccdc141E9Q8Q6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Ccdc141E9Q8Q6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
Ccdc141E9Q8Q6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc141E9Q8Q6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc141E9Q8Q6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Ccdc141E9Q8Q6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC31.35■■■□□ 2.61
Ccdc141E9Q8Q6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc141E9Q8Q6 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc141E9Q8Q6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc141E9Q8Q6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc141E9Q8Q6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Ccdc141E9Q8Q6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Ccdc141E9Q8Q6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc141E9Q8Q6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC31.33■■■□□ 2.61
Ccdc141E9Q8Q6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
Ccdc141E9Q8Q6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Ccdc141E9Q8Q6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Ccdc141E9Q8Q6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC31.32■■■□□ 2.6
Ccdc141E9Q8Q6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Ccdc141E9Q8Q6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Ccdc141E9Q8Q6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC31.31■■■□□ 2.6
Ccdc141E9Q8Q6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Ccdc141E9Q8Q6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC31.31■■■□□ 2.6
Ccdc141E9Q8Q6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms