Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trbv12-2A0A0B4J1H1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.16■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trbv12-2A0A0B4J1H1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gm6311-201ENSMUST00000073790 878 ntBASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv12-2A0A0B4J1H1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 459.3 ms