Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AC133561.1-201ENST00000568600 2415 ntBASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ALDH1A3-203ENST00000557963 1670 ntBASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AC103724.3-201ENST00000564481 992 ntBASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.6■□□□□ 0.57
SAA2-SAA4A0A096LPE2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SAA2-SAA4A0A096LPE2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SAA2-SAA4A0A096LPE2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.58■□□□□ 0.57
SAA2-SAA4A0A096LPE2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SAA2-SAA4A0A096LPE2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.58■□□□□ 0.57
SAA2-SAA4A0A096LPE2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.58■□□□□ 0.56
SAA2-SAA4A0A096LPE2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SAA2-SAA4A0A096LPE2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 ANOS2P-203ENST00000472227 1816 ntBASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SAA2-SAA4A0A096LPE2 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SAA2-SAA4A0A096LPE2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
SAA2-SAA4A0A096LPE2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SAA2-SAA4A0A096LPE2 AL031848.2-201ENST00000607670 837 ntBASIC18.55■□□□□ 0.56
SAA2-SAA4A0A096LPE2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SAA2-SAA4A0A096LPE2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.55■□□□□ 0.56
SAA2-SAA4A0A096LPE2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SAA2-SAA4A0A096LPE2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms