Protein–RNA interactions for Protein: A0A075B642

Trav10, T cell receptor alpha variable 10 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10A0A075B642 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Trav10A0A075B642 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.13■□□□□ 0.49
Trav10A0A075B642 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav10A0A075B642 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav10A0A075B642 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav10A0A075B642 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.13■□□□□ 0.49
Trav10A0A075B642 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav10A0A075B642 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav10A0A075B642 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.12■□□□□ 0.49
Trav10A0A075B642 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav10A0A075B642 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav10A0A075B642 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav10A0A075B642 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav10A0A075B642 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.12■□□□□ 0.49
Trav10A0A075B642 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav10A0A075B642 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.11■□□□□ 0.49
Trav10A0A075B642 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav10A0A075B642 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.11■□□□□ 0.49
Trav10A0A075B642 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav10A0A075B642 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav10A0A075B642 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav10A0A075B642 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav10A0A075B642 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav10A0A075B642 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.1■□□□□ 0.49
Trav10A0A075B642 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav10A0A075B642 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav10A0A075B642 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav10A0A075B642 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trav10A0A075B642 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav10A0A075B642 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav10A0A075B642 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav10A0A075B642 Etf1-202ENSMUST00000180351 108 ntBASIC18.08■□□□□ 0.48
Trav10A0A075B642 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.08■□□□□ 0.48
Trav10A0A075B642 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav10A0A075B642 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav10A0A075B642 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav10A0A075B642 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.06■□□□□ 0.48
Trav10A0A075B642 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Gm7417-201ENSMUST00000192950 473 ntBASIC18.06■□□□□ 0.48
Trav10A0A075B642 Gm9959-201ENSMUST00000068277 390 ntBASIC18.06■□□□□ 0.48
Trav10A0A075B642 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav10A0A075B642 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.05■□□□□ 0.48
Trav10A0A075B642 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.05■□□□□ 0.48
Trav10A0A075B642 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav10A0A075B642 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav10A0A075B642 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav10A0A075B642 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trav10A0A075B642 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav10A0A075B642 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav10A0A075B642 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav10A0A075B642 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav10A0A075B642 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav10A0A075B642 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.02■□□□□ 0.47
Trav10A0A075B642 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms