Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 AC145676.1-201ENST00000514988 2004 ntBASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CSNK1G3Q9Y6M4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.42■■□□□ 1.18
CSNK1G3Q9Y6M4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 ZNRF2P3-201ENST00000424200 374 ntBASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CSNK1G3Q9Y6M4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G3Q9Y6M4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CSNK1G3Q9Y6M4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.4■■□□□ 1.18
CSNK1G3Q9Y6M4 SYT6-210ENST00000641643 1587 ntBASIC22.4■■□□□ 1.18
CSNK1G3Q9Y6M4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
CSNK1G3Q9Y6M4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CSNK1G3Q9Y6M4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CSNK1G3Q9Y6M4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CSNK1G3Q9Y6M4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.39■■□□□ 1.18
CSNK1G3Q9Y6M4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CSNK1G3Q9Y6M4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.39■■□□□ 1.17
CSNK1G3Q9Y6M4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CSNK1G3Q9Y6M4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.39■■□□□ 1.17
CSNK1G3Q9Y6M4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CSNK1G3Q9Y6M4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 AL161729.1-201ENST00000604104 1402 ntBASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
CSNK1G3Q9Y6M4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 AL136967.2-201ENST00000623968 743 ntBASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CSNK1G3Q9Y6M4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 AL138724.1-201ENST00000606771 1088 ntBASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CSNK1G3Q9Y6M4 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 AC009102.2-201ENST00000606772 1639 ntBASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CSNK1G3Q9Y6M4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 MIR939-201ENST00000401314 82 ntBASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22.34■■□□□ 1.17
CSNK1G3Q9Y6M4 AC020928.2-201ENST00000588717 2197 ntBASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CSNK1G3Q9Y6M4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms