Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CSNK1G1Q9HCP0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 AC141586.4-201ENST00000624558 1573 ntBASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 LINC00543-201ENST00000567234 1845 ntBASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CSNK1G1Q9HCP0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSNK1G1Q9HCP0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.11■■□□□ 1.45
CSNK1G1Q9HCP0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.11■■□□□ 1.45
CSNK1G1Q9HCP0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSNK1G1Q9HCP0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSNK1G1Q9HCP0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CSNK1G1Q9HCP0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 AC131281.2-201ENST00000520478 145 ntBASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 AL512631.2-201ENST00000604634 923 ntBASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 ALDH1A3-203ENST00000557963 1670 ntBASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.1■■□□□ 1.45
CSNK1G1Q9HCP0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 LINC01124-201ENST00000409786 2117 ntBASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.09■■□□□ 1.45
CSNK1G1Q9HCP0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.08■■□□□ 1.45
CSNK1G1Q9HCP0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.08■■□□□ 1.44
CSNK1G1Q9HCP0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.07■■□□□ 1.44
CSNK1G1Q9HCP0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G1Q9HCP0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G1Q9HCP0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CSNK1G1Q9HCP0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.07■■□□□ 1.44
CSNK1G1Q9HCP0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CSNK1G1Q9HCP0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G1Q9HCP0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G1Q9HCP0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CSNK1G1Q9HCP0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.06■■□□□ 1.44
CSNK1G1Q9HCP0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSNK1G1Q9HCP0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CSNK1G1Q9HCP0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSNK1G1Q9HCP0 MIR4466-201ENST00000606121 54 ntBASIC24.05■■□□□ 1.44
CSNK1G1Q9HCP0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CSNK1G1Q9HCP0 AC008406.3-201ENST00000620001 1374 ntBASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.04■■□□□ 1.44
CSNK1G1Q9HCP0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CSNK1G1Q9HCP0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
CSNK1G1Q9HCP0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
CSNK1G1Q9HCP0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CSNK1G1Q9HCP0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
CSNK1G1Q9HCP0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.03■■□□□ 1.44
CSNK1G1Q9HCP0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CSNK1G1Q9HCP0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CSNK1G1Q9HCP0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CSNK1G1Q9HCP0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CSNK1G1Q9HCP0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.01■■□□□ 1.43
CSNK1G1Q9HCP0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms