Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.93■□□□□ 0.78
CDH20Q9HBT6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 AC004448.1-201ENST00000458332 883 ntBASIC19.92■□□□□ 0.78
CDH20Q9HBT6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 MTDHP2-201ENST00000601468 714 ntBASIC19.92■□□□□ 0.78
CDH20Q9HBT6 SNX5-217ENST00000606557 1087 ntBASIC19.92■□□□□ 0.78
CDH20Q9HBT6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 LINC00543-201ENST00000567234 1845 ntBASIC19.92■□□□□ 0.78
CDH20Q9HBT6 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDH20Q9HBT6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 GUSBP5-201ENST00000418136 578 ntBASIC19.91■□□□□ 0.78
CDH20Q9HBT6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDH20Q9HBT6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDH20Q9HBT6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.89■□□□□ 0.77
CDH20Q9HBT6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDH20Q9HBT6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 AC010997.5-201ENST00000609182 354 ntBASIC19.87■□□□□ 0.77
CDH20Q9HBT6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
CDH20Q9HBT6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDH20Q9HBT6 KRT16P3-201ENST00000439127 1283 ntBASIC19.86■□□□□ 0.77
CDH20Q9HBT6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms