Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.68■□□□□ 0.58
Hmg20aQ9DC33 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hmg20aQ9DC33 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hmg20aQ9DC33 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hmg20aQ9DC33 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmg20aQ9DC33 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hmg20aQ9DC33 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hmg20aQ9DC33 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.63■□□□□ 0.57
Hmg20aQ9DC33 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Hmg20aQ9DC33 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20aQ9DC33 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20aQ9DC33 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20aQ9DC33 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hmg20aQ9DC33 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hmg20aQ9DC33 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.59■□□□□ 0.57
Hmg20aQ9DC33 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms