Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.79■□□□□ 0.44
Mbd3l1Q9D9H3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mbd3l1Q9D9H3 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.78■□□□□ 0.44
Mbd3l1Q9D9H3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.78■□□□□ 0.44
Mbd3l1Q9D9H3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Mbd3l1Q9D9H3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Mbd3l1Q9D9H3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Mbd3l1Q9D9H3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mbd3l1Q9D9H3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Mbd3l1Q9D9H3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Mbd3l1Q9D9H3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Mbd3l1Q9D9H3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.75■□□□□ 0.43
Mbd3l1Q9D9H3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Mbd3l1Q9D9H3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mbd3l1Q9D9H3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mbd3l1Q9D9H3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mbd3l1Q9D9H3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mbd3l1Q9D9H3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mbd3l1Q9D9H3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Gm16148-201ENSMUST00000119653 893 ntBASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Mbd3l1Q9D9H3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms