Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Sf3a3Q9D554 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Sf3a3Q9D554 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a3Q9D554 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.73■□□□□ 0.91
Sf3a3Q9D554 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.73■□□□□ 0.91
Sf3a3Q9D554 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a3Q9D554 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a3Q9D554 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a3Q9D554 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a3Q9D554 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Sf3a3Q9D554 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sf3a3Q9D554 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a3Q9D554 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sf3a3Q9D554 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.71■□□□□ 0.91
Sf3a3Q9D554 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.71■□□□□ 0.91
Sf3a3Q9D554 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a3Q9D554 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a3Q9D554 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sf3a3Q9D554 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.7■□□□□ 0.9
Sf3a3Q9D554 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a3Q9D554 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Sf3a3Q9D554 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a3Q9D554 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a3Q9D554 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sf3a3Q9D554 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sf3a3Q9D554 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sf3a3Q9D554 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a3Q9D554 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Sf3a3Q9D554 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a3Q9D554 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a3Q9D554 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a3Q9D554 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sf3a3Q9D554 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sf3a3Q9D554 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a3Q9D554 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a3Q9D554 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sf3a3Q9D554 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms