Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC23.89■■□□□ 1.41
COL25A1Q9BXS0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.89■■□□□ 1.41
COL25A1Q9BXS0 AP006294.2-201ENST00000641667 209 ntBASIC23.89■■□□□ 1.41
COL25A1Q9BXS0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
COL25A1Q9BXS0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 PRORSD1P-201ENST00000295112 541 ntBASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 POU5F1P3-201ENST00000428824 1078 ntBASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 AC069152.1-201ENST00000438030 544 ntBASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 AC010331.1-201ENST00000611423 582 ntBASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
COL25A1Q9BXS0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
COL25A1Q9BXS0 AC006455.2-201ENST00000429931 906 ntBASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 AP005435.1-201ENST00000529293 1178 ntBASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 MIR3181-201ENST00000578512 73 ntBASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
COL25A1Q9BXS0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
COL25A1Q9BXS0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC23.84■■□□□ 1.41
COL25A1Q9BXS0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.84■■□□□ 1.41
COL25A1Q9BXS0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL25A1Q9BXS0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
COL25A1Q9BXS0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL25A1Q9BXS0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
COL25A1Q9BXS0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 TSPY6P-201ENST00000448518 926 ntBASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 IGHV3-19-201ENST00000521488 291 ntBASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
COL25A1Q9BXS0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
COL25A1Q9BXS0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 AL138781.1-201ENST00000566567 1274 ntBASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 AL121832.2-201ENST00000610979 668 ntBASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL25A1Q9BXS0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.79■■□□□ 1.4
COL25A1Q9BXS0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.78■■□□□ 1.4
COL25A1Q9BXS0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.78■■□□□ 1.4
COL25A1Q9BXS0 AC083906.2-201ENST00000511578 360 ntBASIC23.78■■□□□ 1.4
COL25A1Q9BXS0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.78■■□□□ 1.4
COL25A1Q9BXS0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 ABCB10P3-201ENST00000561950 2166 ntBASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 FAM210CP-201ENST00000445714 574 ntBASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.77■■□□□ 1.4
COL25A1Q9BXS0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.76■■□□□ 1.39
COL25A1Q9BXS0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.76■■□□□ 1.39
COL25A1Q9BXS0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms