Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdca3Q99M54 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Cdca3Q99M54 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdca3Q99M54 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Gm12922-201ENSMUST00000120626 809 ntBASIC18.93■□□□□ 0.62
Cdca3Q99M54 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.93■□□□□ 0.62
Cdca3Q99M54 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdca3Q99M54 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.92■□□□□ 0.62
Cdca3Q99M54 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.92■□□□□ 0.62
Cdca3Q99M54 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Cdca3Q99M54 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.91■□□□□ 0.62
Cdca3Q99M54 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdca3Q99M54 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdca3Q99M54 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Cdca3Q99M54 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Cdca3Q99M54 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Cdca3Q99M54 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cdca3Q99M54 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Cdca3Q99M54 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdca3Q99M54 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdca3Q99M54 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdca3Q99M54 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdca3Q99M54 Gm27454-201ENSMUST00000185090 204 ntBASIC18.88■□□□□ 0.61
Cdca3Q99M54 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.88■□□□□ 0.61
Cdca3Q99M54 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cdca3Q99M54 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cdca3Q99M54 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.88■□□□□ 0.61
Cdca3Q99M54 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdca3Q99M54 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdca3Q99M54 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.87■□□□□ 0.61
Cdca3Q99M54 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cdca3Q99M54 Gm45417-201ENSMUST00000209533 758 ntBASIC18.87■□□□□ 0.61
Cdca3Q99M54 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdca3Q99M54 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cdca3Q99M54 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cdca3Q99M54 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.86■□□□□ 0.61
Cdca3Q99M54 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.86■□□□□ 0.61
Cdca3Q99M54 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms