Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM56Q96MV1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
TMEM56Q96MV1 EP400NL-214ENST00000641289 2402 ntBASIC18.79■□□□□ 0.6
TMEM56Q96MV1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TMEM56Q96MV1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM56Q96MV1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM56Q96MV1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.77■□□□□ 0.6
TMEM56Q96MV1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM56Q96MV1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TMEM56Q96MV1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
TMEM56Q96MV1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
TMEM56Q96MV1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 AL161729.1-201ENST00000604104 1402 ntBASIC18.76■□□□□ 0.59
TMEM56Q96MV1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.76■□□□□ 0.59
TMEM56Q96MV1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 C1orf229-201ENST00000623686 2258 ntBASIC18.75■□□□□ 0.59
TMEM56Q96MV1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TMEM56Q96MV1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 LINC00565-201ENST00000562710 2331 ntBASIC18.74■□□□□ 0.59
TMEM56Q96MV1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM56Q96MV1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 GPX1-201ENST00000419349 1106 ntBASIC18.73■□□□□ 0.59
TMEM56Q96MV1 MIR4449-201ENST00000578365 66 ntBASIC18.73■□□□□ 0.59
TMEM56Q96MV1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM56Q96MV1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM56Q96MV1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms