Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col20a1Q923P0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col20a1Q923P0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Col20a1Q923P0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Col20a1Q923P0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Col20a1Q923P0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col20a1Q923P0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Col20a1Q923P0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Col20a1Q923P0 Serp2-204ENSMUST00000228055 705 ntBASIC24.42■■□□□ 1.5
Col20a1Q923P0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC24.42■■□□□ 1.5
Col20a1Q923P0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Col20a1Q923P0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
Col20a1Q923P0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col20a1Q923P0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Col20a1Q923P0 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.4■■□□□ 1.5
Col20a1Q923P0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Col20a1Q923P0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Col20a1Q923P0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
Col20a1Q923P0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Col20a1Q923P0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC24.39■■□□□ 1.5
Col20a1Q923P0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.39■■□□□ 1.49
Col20a1Q923P0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Col20a1Q923P0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.38■■□□□ 1.49
Col20a1Q923P0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC24.38■■□□□ 1.49
Col20a1Q923P0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Col20a1Q923P0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Col20a1Q923P0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC24.38■■□□□ 1.49
Col20a1Q923P0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col20a1Q923P0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Col20a1Q923P0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Col20a1Q923P0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Col20a1Q923P0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC24.36■■□□□ 1.49
Col20a1Q923P0 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.36■■□□□ 1.49
Col20a1Q923P0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col20a1Q923P0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col20a1Q923P0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Col20a1Q923P0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col20a1Q923P0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24.35■■□□□ 1.49
Col20a1Q923P0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Col20a1Q923P0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
Col20a1Q923P0 Gm5576-201ENSMUST00000075809 1236 ntBASIC24.35■■□□□ 1.49
Col20a1Q923P0 Gm6139-201ENSMUST00000079261 882 ntBASIC24.35■■□□□ 1.49
Col20a1Q923P0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Col20a1Q923P0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Col20a1Q923P0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC24.34■■□□□ 1.49
Col20a1Q923P0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Col20a1Q923P0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
Col20a1Q923P0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col20a1Q923P0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Col20a1Q923P0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.33■■□□□ 1.48
Col20a1Q923P0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Mir7075-201ENSMUST00000184187 82 ntBASIC24.32■■□□□ 1.48
Col20a1Q923P0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Col20a1Q923P0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Col20a1Q923P0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.31■■□□□ 1.48
Col20a1Q923P0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.31■■□□□ 1.48
Col20a1Q923P0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Col20a1Q923P0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Col20a1Q923P0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Col20a1Q923P0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms