Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lims2Q91XD2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lims2Q91XD2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.27■■□□□ 1
Lims2Q91XD2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Lims2Q91XD2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lims2Q91XD2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lims2Q91XD2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.26■□□□□ 0.99
Lims2Q91XD2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Lims2Q91XD2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Lims2Q91XD2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lims2Q91XD2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lims2Q91XD2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.25■□□□□ 0.99
Lims2Q91XD2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Lims2Q91XD2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Lims2Q91XD2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lims2Q91XD2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Lims2Q91XD2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Lims2Q91XD2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lims2Q91XD2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.23■□□□□ 0.99
Lims2Q91XD2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Lims2Q91XD2 Gm43530-201ENSMUST00000195920 274 ntBASIC21.23■□□□□ 0.99
Lims2Q91XD2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Lims2Q91XD2 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Lims2Q91XD2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.22■□□□□ 0.99
Lims2Q91XD2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Lims2Q91XD2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lims2Q91XD2 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.21■□□□□ 0.99
Lims2Q91XD2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lims2Q91XD2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lims2Q91XD2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lims2Q91XD2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Lims2Q91XD2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Lims2Q91XD2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lims2Q91XD2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Lims2Q91XD2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lims2Q91XD2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Lims2Q91XD2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lims2Q91XD2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.2■□□□□ 0.98
Lims2Q91XD2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lims2Q91XD2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lims2Q91XD2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lims2Q91XD2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lims2Q91XD2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.19■□□□□ 0.98
Lims2Q91XD2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lims2Q91XD2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lims2Q91XD2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.18■□□□□ 0.98
Lims2Q91XD2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Lims2Q91XD2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lims2Q91XD2 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lims2Q91XD2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.17■□□□□ 0.98
Lims2Q91XD2 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.17■□□□□ 0.98
Lims2Q91XD2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Lims2Q91XD2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lims2Q91XD2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lims2Q91XD2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.17■□□□□ 0.98
Lims2Q91XD2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lims2Q91XD2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.16■□□□□ 0.98
Lims2Q91XD2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lims2Q91XD2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Lims2Q91XD2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lims2Q91XD2 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lims2Q91XD2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.15■□□□□ 0.98
Lims2Q91XD2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lims2Q91XD2 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.14■□□□□ 0.97
Lims2Q91XD2 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms