Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 BX664725.1-201ENST00000438252 379 ntBASIC23.14■■□□□ 1.29
PTCD2Q8WV60 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 MIR4787-201ENST00000607364 84 ntBASIC23.14■■□□□ 1.29
PTCD2Q8WV60 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.14■■□□□ 1.29
PTCD2Q8WV60 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 AC021242.3-201ENST00000607598 1377 ntBASIC23.13■■□□□ 1.29
PTCD2Q8WV60 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PTCD2Q8WV60 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PTCD2Q8WV60 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PTCD2Q8WV60 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD2Q8WV60 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PTCD2Q8WV60 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD2Q8WV60 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD2Q8WV60 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PTCD2Q8WV60 AF131216.4-201ENST00000638924 1588 ntBASIC23.1■■□□□ 1.29
PTCD2Q8WV60 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 AL356441.2-201ENST00000443009 864 ntBASIC23.09■■□□□ 1.29
PTCD2Q8WV60 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 UNC93B8-201ENST00000511903 705 ntBASIC23.09■■□□□ 1.29
PTCD2Q8WV60 KRT125P-201ENST00000546827 989 ntBASIC23.09■■□□□ 1.29
PTCD2Q8WV60 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PTCD2Q8WV60 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.08■■□□□ 1.29
PTCD2Q8WV60 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.08■■□□□ 1.29
PTCD2Q8WV60 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PTCD2Q8WV60 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PTCD2Q8WV60 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PTCD2Q8WV60 AC131274.2-201ENST00000580697 1507 ntBASIC23.07■■□□□ 1.28
PTCD2Q8WV60 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.06■■□□□ 1.28
PTCD2Q8WV60 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 1035.1 ms