Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rpa1Q8VEE4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.61■□□□□ 0.89
Rpa1Q8VEE4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rpa1Q8VEE4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rpa1Q8VEE4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rpa1Q8VEE4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpa1Q8VEE4 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rpa1Q8VEE4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpa1Q8VEE4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rpa1Q8VEE4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.58■□□□□ 0.88
Rpa1Q8VEE4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpa1Q8VEE4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpa1Q8VEE4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rpa1Q8VEE4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa1Q8VEE4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.55■□□□□ 0.88
Rpa1Q8VEE4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa1Q8VEE4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa1Q8VEE4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpa1Q8VEE4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.52■□□□□ 0.88
Rpa1Q8VEE4 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.52■□□□□ 0.88
Rpa1Q8VEE4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.52■□□□□ 0.88
Rpa1Q8VEE4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpa1Q8VEE4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpa1Q8VEE4 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa1Q8VEE4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms