Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Upb1Q8VC97 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Upb1Q8VC97 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Upb1Q8VC97 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Upb1Q8VC97 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Upb1Q8VC97 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Upb1Q8VC97 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Upb1Q8VC97 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC22.39■■□□□ 1.17
Upb1Q8VC97 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Upb1Q8VC97 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Upb1Q8VC97 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Upb1Q8VC97 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.37■■□□□ 1.17
Upb1Q8VC97 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Upb1Q8VC97 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Gm8770-201ENSMUST00000121113 1109 ntBASIC22.36■■□□□ 1.17
Upb1Q8VC97 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Gm27454-201ENSMUST00000185090 204 ntBASIC22.36■■□□□ 1.17
Upb1Q8VC97 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Upb1Q8VC97 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Upb1Q8VC97 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.35■■□□□ 1.17
Upb1Q8VC97 Gm43530-201ENSMUST00000195920 274 ntBASIC22.35■■□□□ 1.17
Upb1Q8VC97 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Upb1Q8VC97 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Upb1Q8VC97 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Upb1Q8VC97 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Upb1Q8VC97 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Upb1Q8VC97 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Upb1Q8VC97 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Upb1Q8VC97 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.33■■□□□ 1.17
Upb1Q8VC97 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.33■■□□□ 1.17
Upb1Q8VC97 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC22.33■■□□□ 1.17
Upb1Q8VC97 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Upb1Q8VC97 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Upb1Q8VC97 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Upb1Q8VC97 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Upb1Q8VC97 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Upb1Q8VC97 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Upb1Q8VC97 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.31■■□□□ 1.16
Upb1Q8VC97 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.31■■□□□ 1.16
Upb1Q8VC97 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Upb1Q8VC97 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Upb1Q8VC97 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Upb1Q8VC97 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.3■■□□□ 1.16
Upb1Q8VC97 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC22.3■■□□□ 1.16
Upb1Q8VC97 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Upb1Q8VC97 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.3■■□□□ 1.16
Upb1Q8VC97 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.29■■□□□ 1.16
Upb1Q8VC97 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Upb1Q8VC97 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Upb1Q8VC97 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Upb1Q8VC97 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Upb1Q8VC97 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.28■■□□□ 1.16
Upb1Q8VC97 Gm45417-201ENSMUST00000209533 758 ntBASIC22.28■■□□□ 1.16
Upb1Q8VC97 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms