Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SIMC1Q8NDZ2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.5■■□□□ 1.03
SIMC1Q8NDZ2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIMC1Q8NDZ2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIMC1Q8NDZ2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 AC009299.2-201ENST00000482477 511 ntBASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 AC137630.3-201ENST00000607245 391 ntBASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.47■■□□□ 1.03
SIMC1Q8NDZ2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIMC1Q8NDZ2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIMC1Q8NDZ2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIMC1Q8NDZ2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 AL022069.1-201ENST00000568025 1636 ntBASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SIMC1Q8NDZ2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SIMC1Q8NDZ2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 151.9 ms