Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KRT78Q8N1N4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
KRT78Q8N1N4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
KRT78Q8N1N4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
KRT78Q8N1N4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 AC004448.1-201ENST00000458332 883 ntBASIC22.01■■□□□ 1.11
KRT78Q8N1N4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
KRT78Q8N1N4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22■■□□□ 1.11
KRT78Q8N1N4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22■■□□□ 1.11
KRT78Q8N1N4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KRT78Q8N1N4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.99■■□□□ 1.11
KRT78Q8N1N4 AC021242.3-201ENST00000607598 1377 ntBASIC21.99■■□□□ 1.11
KRT78Q8N1N4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 KRT125P-201ENST00000546827 989 ntBASIC21.98■■□□□ 1.11
KRT78Q8N1N4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 Z92544.1-202ENST00000571933 1220 ntBASIC21.98■■□□□ 1.11
KRT78Q8N1N4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KRT78Q8N1N4 ALDH1A3-203ENST00000557963 1670 ntBASIC21.98■■□□□ 1.11
KRT78Q8N1N4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KRT78Q8N1N4 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KRT78Q8N1N4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
KRT78Q8N1N4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KRT78Q8N1N4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 AL451085.2-201ENST00000605085 799 ntBASIC21.94■■□□□ 1.1
KRT78Q8N1N4 SNX5-217ENST00000606557 1087 ntBASIC21.94■■□□□ 1.1
KRT78Q8N1N4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KRT78Q8N1N4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms