Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mmp28Q8CGV8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Mmp28Q8CGV8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mmp28Q8CGV8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mmp28Q8CGV8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mmp28Q8CGV8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Gm9806-201ENSMUST00000051080 552 ntBASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mmp28Q8CGV8 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp28Q8CGV8 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Scarna2-201ENSMUST00000157560 414 ntBASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp28Q8CGV8 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Mmp28Q8CGV8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp28Q8CGV8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp28Q8CGV8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.34■□□□□ 0.37
Mmp28Q8CGV8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Mmp28Q8CGV8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp28Q8CGV8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms