Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.71■■□□□ 1.07
Brat1Q8C3R1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Brat1Q8C3R1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Golgb1-201ENSMUST00000023534 498 ntBASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Brat1Q8C3R1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Brat1Q8C3R1 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Gm13241-201ENSMUST00000094493 780 ntBASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Brat1Q8C3R1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Brat1Q8C3R1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Brat1Q8C3R1 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Brat1Q8C3R1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Brat1Q8C3R1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Brat1Q8C3R1 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.64■■□□□ 1.05
Brat1Q8C3R1 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.64■■□□□ 1.05
Brat1Q8C3R1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Brat1Q8C3R1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Brat1Q8C3R1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brat1Q8C3R1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Brat1Q8C3R1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.63■■□□□ 1.05
Brat1Q8C3R1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
Brat1Q8C3R1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Brat1Q8C3R1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brat1Q8C3R1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brat1Q8C3R1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Brat1Q8C3R1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Brat1Q8C3R1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.6■■□□□ 1.05
Brat1Q8C3R1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Brat1Q8C3R1 Gm21956-201ENSMUST00000179946 522 ntBASIC21.6■■□□□ 1.05
Brat1Q8C3R1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Brat1Q8C3R1 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.6■■□□□ 1.05
Brat1Q8C3R1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 261.5 ms