Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.61■□□□□ 0.89
Ddx42Q810A7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx42Q810A7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.61■□□□□ 0.89
Ddx42Q810A7 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ddx42Q810A7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.6■□□□□ 0.89
Ddx42Q810A7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.6■□□□□ 0.89
Ddx42Q810A7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx42Q810A7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx42Q810A7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx42Q810A7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.58■□□□□ 0.88
Ddx42Q810A7 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx42Q810A7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx42Q810A7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Ddx42Q810A7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx42Q810A7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx42Q810A7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx42Q810A7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.54■□□□□ 0.88
Ddx42Q810A7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.54■□□□□ 0.88
Ddx42Q810A7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.54■□□□□ 0.88
Ddx42Q810A7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx42Q810A7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx42Q810A7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Gm45102-201ENSMUST00000207427 857 ntBASIC20.53■□□□□ 0.88
Ddx42Q810A7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ddx42Q810A7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ddx42Q810A7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms