Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp8Q80U87 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp8Q80U87 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp8Q80U87 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Usp8Q80U87 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp8Q80U87 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.47■□□□□ 0.87
Usp8Q80U87 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Gm45444-201ENSMUST00000211394 898 ntBASIC20.47■□□□□ 0.87
Usp8Q80U87 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.47■□□□□ 0.87
Usp8Q80U87 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp8Q80U87 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Usp8Q80U87 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp8Q80U87 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Usp8Q80U87 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Usp8Q80U87 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp8Q80U87 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp8Q80U87 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Usp8Q80U87 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp8Q80U87 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp8Q80U87 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp8Q80U87 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp8Q80U87 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp8Q80U87 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp8Q80U87 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp8Q80U87 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp8Q80U87 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.44■□□□□ 0.86
Usp8Q80U87 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.44■□□□□ 0.86
Usp8Q80U87 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.44■□□□□ 0.86
Usp8Q80U87 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp8Q80U87 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp8Q80U87 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp8Q80U87 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp8Q80U87 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp8Q80U87 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp8Q80U87 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Usp8Q80U87 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.42■□□□□ 0.86
Usp8Q80U87 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp8Q80U87 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp8Q80U87 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.41■□□□□ 0.86
Usp8Q80U87 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.41■□□□□ 0.86
Usp8Q80U87 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp8Q80U87 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.41■□□□□ 0.86
Usp8Q80U87 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp8Q80U87 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp8Q80U87 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp8Q80U87 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp8Q80U87 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Usp8Q80U87 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp8Q80U87 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp8Q80U87 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Usp8Q80U87 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp8Q80U87 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp8Q80U87 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Usp8Q80U87 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp8Q80U87 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp8Q80U87 Gm5921-201ENSMUST00000075898 882 ntBASIC20.39■□□□□ 0.85
Usp8Q80U87 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp8Q80U87 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.38■□□□□ 0.85
Usp8Q80U87 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Usp8Q80U87 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Usp8Q80U87 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp8Q80U87 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp8Q80U87 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.37■□□□□ 0.85
Usp8Q80U87 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Usp8Q80U87 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms