Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rpap1Q80TE0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rpap1Q80TE0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Rpap1Q80TE0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC32.51■■■□□ 2.8
Rpap1Q80TE0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
Rpap1Q80TE0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
Rpap1Q80TE0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
Rpap1Q80TE0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rpap1Q80TE0 Gm10129-202ENSMUST00000193100 1316 ntBASIC32.51■■■□□ 2.79
Rpap1Q80TE0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rpap1Q80TE0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
Rpap1Q80TE0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Gm27011-201ENSMUST00000182352 972 ntBASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rpap1Q80TE0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Rpap1Q80TE0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Rpap1Q80TE0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC32.49■■■□□ 2.79
Rpap1Q80TE0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC32.49■■■□□ 2.79
Rpap1Q80TE0 Gm42642-201ENSMUST00000200683 355 ntBASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rpap1Q80TE0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rpap1Q80TE0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rpap1Q80TE0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Rpap1Q80TE0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Rpap1Q80TE0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Rpap1Q80TE0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Rpap1Q80TE0 AC112142.1-201ENSMUST00000228796 918 ntBASIC32.45■■■□□ 2.79
Rpap1Q80TE0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rpap1Q80TE0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rpap1Q80TE0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rpap1Q80TE0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Rpap1Q80TE0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Rpap1Q80TE0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Rpap1Q80TE0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC32.43■■■□□ 2.78
Rpap1Q80TE0 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rpap1Q80TE0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rpap1Q80TE0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rpap1Q80TE0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC32.43■■■□□ 2.78
Rpap1Q80TE0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Rpap1Q80TE0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rpap1Q80TE0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC32.41■■■□□ 2.78
Rpap1Q80TE0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rpap1Q80TE0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rpap1Q80TE0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC32.41■■■□□ 2.78
Rpap1Q80TE0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rpap1Q80TE0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
Rpap1Q80TE0 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Rpap1Q80TE0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC32.4■■■□□ 2.78
Rpap1Q80TE0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rpap1Q80TE0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rpap1Q80TE0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rpap1Q80TE0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC32.39■■■□□ 2.78
Rpap1Q80TE0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC32.39■■■□□ 2.78
Rpap1Q80TE0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rpap1Q80TE0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rpap1Q80TE0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC32.37■■■□□ 2.77
Rpap1Q80TE0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC32.37■■■□□ 2.77
Rpap1Q80TE0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Rpap1Q80TE0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC32.36■■■□□ 2.77
Rpap1Q80TE0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rpap1Q80TE0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rpap1Q80TE0 Smad6-203ENSMUST00000179458 273 ntBASIC32.35■■■□□ 2.77
Rpap1Q80TE0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rpap1Q80TE0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rpap1Q80TE0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Rpap1Q80TE0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rpap1Q80TE0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rpap1Q80TE0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms