Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
Rtl1Q7M732 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
Rtl1Q7M732 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Rtl1Q7M732 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Rtl1Q7M732 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
Rtl1Q7M732 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC37.27■■■■□ 3.56
Rtl1Q7M732 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC37.26■■■■□ 3.56
Rtl1Q7M732 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC37.26■■■■□ 3.55
Rtl1Q7M732 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC37.26■■■■□ 3.55
Rtl1Q7M732 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Rtl1Q7M732 Gm7143-201ENSMUST00000222811 859 ntBASIC37.25■■■■□ 3.55
Rtl1Q7M732 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
Rtl1Q7M732 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Rtl1Q7M732 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
Rtl1Q7M732 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC37.24■■■■□ 3.55
Rtl1Q7M732 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
Rtl1Q7M732 Gm44949-201ENSMUST00000206423 1450 ntBASIC37.24■■■■□ 3.55
Rtl1Q7M732 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC37.24■■■■□ 3.55
Rtl1Q7M732 Gm12251-201ENSMUST00000117893 792 ntBASIC37.24■■■■□ 3.55
Rtl1Q7M732 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC37.24■■■■□ 3.55
Rtl1Q7M732 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC37.24■■■■□ 3.55
Rtl1Q7M732 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC37.23■■■■□ 3.55
Rtl1Q7M732 Krt8-ps-201ENSMUST00000208495 945 ntBASIC37.23■■■■□ 3.55
Rtl1Q7M732 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC37.23■■■■□ 3.55
Rtl1Q7M732 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
Rtl1Q7M732 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC37.22■■■■□ 3.55
Rtl1Q7M732 Gm9870-201ENSMUST00000063874 645 ntBASIC37.22■■■■□ 3.55
Rtl1Q7M732 Gm43006-201ENSMUST00000197702 1602 ntBASIC37.21■■■■□ 3.55
Rtl1Q7M732 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC37.21■■■■□ 3.55
Rtl1Q7M732 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
Rtl1Q7M732 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC37.21■■■■□ 3.55
Rtl1Q7M732 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC37.2■■■■□ 3.55
Rtl1Q7M732 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC37.2■■■■□ 3.55
Rtl1Q7M732 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC37.19■■■■□ 3.54
Rtl1Q7M732 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC37.19■■■■□ 3.54
Rtl1Q7M732 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
Rtl1Q7M732 Gm43530-201ENSMUST00000195920 274 ntBASIC37.19■■■■□ 3.54
Rtl1Q7M732 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
Rtl1Q7M732 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC37.18■■■■□ 3.54
Rtl1Q7M732 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Rtl1Q7M732 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Rtl1Q7M732 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Rtl1Q7M732 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Rtl1Q7M732 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
Rtl1Q7M732 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
Rtl1Q7M732 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Rtl1Q7M732 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
Rtl1Q7M732 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC37.15■■■■□ 3.54
Rtl1Q7M732 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
Rtl1Q7M732 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
Rtl1Q7M732 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
Rtl1Q7M732 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC37.14■■■■□ 3.54
Rtl1Q7M732 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC37.14■■■■□ 3.54
Rtl1Q7M732 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC37.14■■■■□ 3.54
Rtl1Q7M732 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC37.13■■■■□ 3.54
Rtl1Q7M732 Gm12504-201ENSMUST00000120860 2231 ntBASIC37.13■■■■□ 3.53
Rtl1Q7M732 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rtl1Q7M732 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC37.13■■■■□ 3.53
Rtl1Q7M732 Gm43759-201ENSMUST00000196925 1261 ntBASIC37.13■■■■□ 3.53
Rtl1Q7M732 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC37.12■■■■□ 3.53
Rtl1Q7M732 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Rtl1Q7M732 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC37.11■■■■□ 3.53
Rtl1Q7M732 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC37.1■■■■□ 3.53
Rtl1Q7M732 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rtl1Q7M732 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Rtl1Q7M732 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rtl1Q7M732 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rtl1Q7M732 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC37.1■■■■□ 3.53
Rtl1Q7M732 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Rtl1Q7M732 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
Rtl1Q7M732 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC37.09■■■■□ 3.53
Rtl1Q7M732 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Rtl1Q7M732 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC37.08■■■■□ 3.53
Rtl1Q7M732 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC37.08■■■■□ 3.53
Rtl1Q7M732 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC37.07■■■■□ 3.53
Rtl1Q7M732 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Rtl1Q7M732 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Rtl1Q7M732 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC37.06■■■■□ 3.52
Rtl1Q7M732 Gm43137-201ENSMUST00000198052 594 ntBASIC37.06■■■■□ 3.52
Rtl1Q7M732 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC37.06■■■■□ 3.52
Rtl1Q7M732 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC37.05■■■■□ 3.52
Rtl1Q7M732 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Rtl1Q7M732 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
Rtl1Q7M732 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Rtl1Q7M732 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC37.05■■■■□ 3.52
Rtl1Q7M732 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC37.05■■■■□ 3.52
Rtl1Q7M732 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Rtl1Q7M732 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
Rtl1Q7M732 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC37.04■■■■□ 3.52
Rtl1Q7M732 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC37.03■■■■□ 3.52
Rtl1Q7M732 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC37.03■■■■□ 3.52
Rtl1Q7M732 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
Rtl1Q7M732 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
Rtl1Q7M732 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC37.02■■■■□ 3.52
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms