Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Gm7432-201ENSMUST00000210343 879 ntBASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cnih3Q6ZWS4 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cnih3Q6ZWS4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cnih3Q6ZWS4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 Gm11599-201ENSMUST00000118720 878 ntBASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cnih3Q6ZWS4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cnih3Q6ZWS4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cnih3Q6ZWS4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cnih3Q6ZWS4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cnih3Q6ZWS4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnih3Q6ZWS4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cnih3Q6ZWS4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.83■□□□□ 0.61
Cnih3Q6ZWS4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnih3Q6ZWS4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnih3Q6ZWS4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cnih3Q6ZWS4 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cnih3Q6ZWS4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 121.2 ms