Protein–RNA interactions for Protein: Q6A4J8

Usp7, Ubiquitin carboxyl-terminal hydrolase 7, mousemouse

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp7Q6A4J8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Usp7Q6A4J8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.47■□□□□ 0.87
Usp7Q6A4J8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp7Q6A4J8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp7Q6A4J8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Gm45417-201ENSMUST00000209533 758 ntBASIC20.46■□□□□ 0.87
Usp7Q6A4J8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Usp7Q6A4J8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.45■□□□□ 0.87
Usp7Q6A4J8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.45■□□□□ 0.86
Usp7Q6A4J8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Usp7Q6A4J8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.43■□□□□ 0.86
Usp7Q6A4J8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Usp7Q6A4J8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Usp7Q6A4J8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Usp7Q6A4J8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Usp7Q6A4J8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Usp7Q6A4J8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp7Q6A4J8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Usp7Q6A4J8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Usp7Q6A4J8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Usp7Q6A4J8 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.39■□□□□ 0.86
Usp7Q6A4J8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Usp7Q6A4J8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Usp7Q6A4J8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp7Q6A4J8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.39■□□□□ 0.85
Usp7Q6A4J8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.39■□□□□ 0.85
Usp7Q6A4J8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Usp7Q6A4J8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Usp7Q6A4J8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Usp7Q6A4J8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp7Q6A4J8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp7Q6A4J8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp7Q6A4J8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms