Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC22.26■■□□□ 1.15
R3hdm4Q4VBF2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
R3hdm4Q4VBF2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
R3hdm4Q4VBF2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
R3hdm4Q4VBF2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
R3hdm4Q4VBF2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
R3hdm4Q4VBF2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
R3hdm4Q4VBF2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.23■■□□□ 1.15
R3hdm4Q4VBF2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Gm7143-201ENSMUST00000222811 859 ntBASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Gm9870-201ENSMUST00000063874 645 ntBASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC22.22■■□□□ 1.15
R3hdm4Q4VBF2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3hdm4Q4VBF2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
R3hdm4Q4VBF2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.2■■□□□ 1.14
R3hdm4Q4VBF2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
R3hdm4Q4VBF2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
R3hdm4Q4VBF2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
R3hdm4Q4VBF2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
R3hdm4Q4VBF2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3hdm4Q4VBF2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3hdm4Q4VBF2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3hdm4Q4VBF2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3hdm4Q4VBF2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.17■■□□□ 1.14
R3hdm4Q4VBF2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.17■■□□□ 1.14
R3hdm4Q4VBF2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
R3hdm4Q4VBF2 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
R3hdm4Q4VBF2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3hdm4Q4VBF2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3hdm4Q4VBF2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
R3hdm4Q4VBF2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
R3hdm4Q4VBF2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
R3hdm4Q4VBF2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3hdm4Q4VBF2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
R3hdm4Q4VBF2 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.13■■□□□ 1.13
R3hdm4Q4VBF2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
R3hdm4Q4VBF2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hdm4Q4VBF2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hdm4Q4VBF2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
R3hdm4Q4VBF2 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3hdm4Q4VBF2 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms