Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.82■■□□□ 1.88
Uspl1Q3ULM6 Gm9870-201ENSMUST00000063874 645 ntBASIC26.82■■□□□ 1.88
Uspl1Q3ULM6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Uspl1Q3ULM6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC26.81■■□□□ 1.88
Uspl1Q3ULM6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Uspl1Q3ULM6 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Uspl1Q3ULM6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Uspl1Q3ULM6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC26.79■■□□□ 1.88
Uspl1Q3ULM6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Uspl1Q3ULM6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
Uspl1Q3ULM6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC26.78■■□□□ 1.88
Uspl1Q3ULM6 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Uspl1Q3ULM6 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Uspl1Q3ULM6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Uspl1Q3ULM6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.77■■□□□ 1.88
Uspl1Q3ULM6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Uspl1Q3ULM6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Uspl1Q3ULM6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Uspl1Q3ULM6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
Uspl1Q3ULM6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
Uspl1Q3ULM6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Uspl1Q3ULM6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Uspl1Q3ULM6 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Uspl1Q3ULM6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Uspl1Q3ULM6 Gm38160-201ENSMUST00000193090 2499 ntBASIC26.75■■□□□ 1.87
Uspl1Q3ULM6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Uspl1Q3ULM6 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Uspl1Q3ULM6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Uspl1Q3ULM6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Uspl1Q3ULM6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Uspl1Q3ULM6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Uspl1Q3ULM6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Uspl1Q3ULM6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Uspl1Q3ULM6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.7■■□□□ 1.86
Uspl1Q3ULM6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Uspl1Q3ULM6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Uspl1Q3ULM6 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Uspl1Q3ULM6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Uspl1Q3ULM6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Uspl1Q3ULM6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Uspl1Q3ULM6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Uspl1Q3ULM6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC26.67■■□□□ 1.86
Uspl1Q3ULM6 Krt8-ps-201ENSMUST00000208495 945 ntBASIC26.67■■□□□ 1.86
Uspl1Q3ULM6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Uspl1Q3ULM6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Uspl1Q3ULM6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Uspl1Q3ULM6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Uspl1Q3ULM6 Gm43006-201ENSMUST00000197702 1602 ntBASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Uspl1Q3ULM6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms