Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-3Q3UHX8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-3Q3UHX8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-3Q3UHX8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-3Q3UHX8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nkx6-3Q3UHX8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx6-3Q3UHX8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx6-3Q3UHX8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx6-3Q3UHX8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx6-3Q3UHX8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx6-3Q3UHX8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx6-3Q3UHX8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx6-3Q3UHX8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-3Q3UHX8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.44■□□□□ 0.7
Nkx6-3Q3UHX8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.44■□□□□ 0.7
Nkx6-3Q3UHX8 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx6-3Q3UHX8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Nkx6-3Q3UHX8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.43■□□□□ 0.7
Nkx6-3Q3UHX8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-3Q3UHX8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-3Q3UHX8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.42■□□□□ 0.7
Nkx6-3Q3UHX8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Nkx6-3Q3UHX8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx6-3Q3UHX8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx6-3Q3UHX8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Gm43530-201ENSMUST00000195920 274 ntBASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx6-3Q3UHX8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms