Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Brf2Q3UAW9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
Brf2Q3UAW9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brf2Q3UAW9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brf2Q3UAW9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Brf2Q3UAW9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Brf2Q3UAW9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Brf2Q3UAW9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Brf2Q3UAW9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brf2Q3UAW9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Brf2Q3UAW9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Brf2Q3UAW9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.33■□□□□ 0.68
Brf2Q3UAW9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Brf2Q3UAW9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Brf2Q3UAW9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Brf2Q3UAW9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Brf2Q3UAW9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Brf2Q3UAW9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Brf2Q3UAW9 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.27■□□□□ 0.68
Brf2Q3UAW9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Brf2Q3UAW9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Brf2Q3UAW9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brf2Q3UAW9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Brf2Q3UAW9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.25■□□□□ 0.67
Brf2Q3UAW9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brf2Q3UAW9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Brf2Q3UAW9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.25■□□□□ 0.67
Brf2Q3UAW9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms