Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pfdn6Q03958 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.57■□□□□ 0.88
Pfdn6Q03958 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn6Q03958 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn6Q03958 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn6Q03958 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pfdn6Q03958 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.57■□□□□ 0.88
Pfdn6Q03958 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pfdn6Q03958 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pfdn6Q03958 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn6Q03958 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pfdn6Q03958 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pfdn6Q03958 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pfdn6Q03958 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.54■□□□□ 0.88
Pfdn6Q03958 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pfdn6Q03958 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.54■□□□□ 0.88
Pfdn6Q03958 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.54■□□□□ 0.88
Pfdn6Q03958 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.53■□□□□ 0.88
Pfdn6Q03958 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pfdn6Q03958 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pfdn6Q03958 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pfdn6Q03958 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.52■□□□□ 0.88
Pfdn6Q03958 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pfdn6Q03958 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pfdn6Q03958 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Pfdn6Q03958 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.52■□□□□ 0.87
Pfdn6Q03958 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.51■□□□□ 0.87
Pfdn6Q03958 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pfdn6Q03958 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.5■□□□□ 0.87
Pfdn6Q03958 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pfdn6Q03958 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pfdn6Q03958 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.49■□□□□ 0.87
Pfdn6Q03958 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn6Q03958 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn6Q03958 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn6Q03958 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn6Q03958 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pfdn6Q03958 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pfdn6Q03958 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.48■□□□□ 0.87
Pfdn6Q03958 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn6Q03958 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn6Q03958 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.48■□□□□ 0.87
Pfdn6Q03958 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.48■□□□□ 0.87
Pfdn6Q03958 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Pfdn6Q03958 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
Pfdn6Q03958 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn6Q03958 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pfdn6Q03958 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn6Q03958 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pfdn6Q03958 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms