Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Six5P70178 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Six5P70178 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Six5P70178 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.22■□□□□ 0.67
Six5P70178 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Six5P70178 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six5P70178 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.21■□□□□ 0.67
Six5P70178 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six5P70178 Etf1-202ENSMUST00000180351 108 ntBASIC19.21■□□□□ 0.67
Six5P70178 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Six5P70178 Gm9959-201ENSMUST00000068277 390 ntBASIC19.21■□□□□ 0.67
Six5P70178 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Six5P70178 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.21■□□□□ 0.67
Six5P70178 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six5P70178 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six5P70178 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Six5P70178 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Six5P70178 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six5P70178 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six5P70178 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Six5P70178 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Six5P70178 Gm45102-201ENSMUST00000207427 857 ntBASIC19.2■□□□□ 0.66
Six5P70178 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Six5P70178 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Six5P70178 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Six5P70178 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six5P70178 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six5P70178 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Six5P70178 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Six5P70178 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.19■□□□□ 0.66
Six5P70178 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.19■□□□□ 0.66
Six5P70178 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Six5P70178 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six5P70178 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six5P70178 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Six5P70178 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Six5P70178 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Six5P70178 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Six5P70178 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.18■□□□□ 0.66
Six5P70178 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.18■□□□□ 0.66
Six5P70178 Rps24-207ENSMUST00000224568 714 ntBASIC19.18■□□□□ 0.66
Six5P70178 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Six5P70178 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Six5P70178 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Six5P70178 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six5P70178 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six5P70178 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six5P70178 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.17■□□□□ 0.66
Six5P70178 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.17■□□□□ 0.66
Six5P70178 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Six5P70178 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six5P70178 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six5P70178 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Six5P70178 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six5P70178 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.16■□□□□ 0.66
Six5P70178 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six5P70178 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six5P70178 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.16■□□□□ 0.66
Six5P70178 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six5P70178 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Six5P70178 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six5P70178 Gm7143-201ENSMUST00000222811 859 ntBASIC19.15■□□□□ 0.66
Six5P70178 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Six5P70178 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six5P70178 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.14■□□□□ 0.66
Six5P70178 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Six5P70178 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six5P70178 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six5P70178 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six5P70178 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six5P70178 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six5P70178 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six5P70178 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six5P70178 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six5P70178 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
Six5P70178 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six5P70178 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six5P70178 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Six5P70178 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six5P70178 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Six5P70178 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six5P70178 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six5P70178 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms