Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tubgcp3P58854 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tubgcp3P58854 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tubgcp3P58854 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Tubgcp3P58854 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tubgcp3P58854 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Tubgcp3P58854 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.95■□□□□ 0.94
Tubgcp3P58854 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tubgcp3P58854 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tubgcp3P58854 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Tubgcp3P58854 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Gm10399-202ENSMUST00000202768 748 ntBASIC20.92■□□□□ 0.94
Tubgcp3P58854 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tubgcp3P58854 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.91■□□□□ 0.94
Tubgcp3P58854 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp3P58854 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.91■□□□□ 0.94
Tubgcp3P58854 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.91■□□□□ 0.94
Tubgcp3P58854 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.91■□□□□ 0.94
Tubgcp3P58854 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.91■□□□□ 0.94
Tubgcp3P58854 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.91■□□□□ 0.94
Tubgcp3P58854 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp3P58854 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp3P58854 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp3P58854 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp3P58854 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tubgcp3P58854 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp3P58854 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp3P58854 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp3P58854 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp3P58854 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.9■□□□□ 0.94
Tubgcp3P58854 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp3P58854 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp3P58854 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp3P58854 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp3P58854 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp3P58854 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp3P58854 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.89■□□□□ 0.93
Tubgcp3P58854 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp3P58854 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Tubgcp3P58854 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tubgcp3P58854 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.88■□□□□ 0.93
Tubgcp3P58854 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tubgcp3P58854 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp3P58854 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp3P58854 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Tubgcp3P58854 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp3P58854 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp3P58854 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp3P58854 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp3P58854 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp3P58854 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms