Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-6P43688 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-6P43688 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Nkx2-6P43688 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-6P43688 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Nkx2-6P43688 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Nkx2-6P43688 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Nkx2-6P43688 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.46■□□□□ 0.71
Nkx2-6P43688 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Nkx2-6P43688 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-6P43688 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.44■□□□□ 0.7
Nkx2-6P43688 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-6P43688 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-6P43688 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-6P43688 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Nkx2-6P43688 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-6P43688 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.43■□□□□ 0.7
Nkx2-6P43688 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-6P43688 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-6P43688 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-6P43688 Gm6139-201ENSMUST00000079261 882 ntBASIC19.43■□□□□ 0.7
Nkx2-6P43688 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nkx2-6P43688 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nkx2-6P43688 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-6P43688 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.41■□□□□ 0.7
Nkx2-6P43688 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Nkx2-6P43688 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-6P43688 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-6P43688 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.4■□□□□ 0.7
Nkx2-6P43688 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Nkx2-6P43688 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nkx2-6P43688 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.4■□□□□ 0.7
Nkx2-6P43688 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nkx2-6P43688 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-6P43688 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.39■□□□□ 0.69
Nkx2-6P43688 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.39■□□□□ 0.69
Nkx2-6P43688 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-6P43688 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.39■□□□□ 0.69
Nkx2-6P43688 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-6P43688 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nkx2-6P43688 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Nkx2-6P43688 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Nkx2-6P43688 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-6P43688 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-6P43688 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.38■□□□□ 0.69
Nkx2-6P43688 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.38■□□□□ 0.69
Nkx2-6P43688 Gm43137-201ENSMUST00000198052 594 ntBASIC19.38■□□□□ 0.69
Nkx2-6P43688 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.38■□□□□ 0.69
Nkx2-6P43688 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Nkx2-6P43688 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nkx2-6P43688 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx2-6P43688 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-6P43688 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-6P43688 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx2-6P43688 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Nkx2-6P43688 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nkx2-6P43688 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-6P43688 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.35■□□□□ 0.69
Nkx2-6P43688 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nkx2-6P43688 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-6P43688 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms