Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL15A1P39059 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL15A1P39059 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
COL15A1P39059 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC29.34■■■□□ 2.29
COL15A1P39059 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC29.34■■■□□ 2.29
COL15A1P39059 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL15A1P39059 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC29.34■■■□□ 2.29
COL15A1P39059 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
COL15A1P39059 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC29.33■■■□□ 2.29
COL15A1P39059 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC29.33■■■□□ 2.29
COL15A1P39059 AC027682.1-201ENST00000562846 899 ntBASIC29.33■■■□□ 2.29
COL15A1P39059 AC099791.2-201ENST00000605725 427 ntBASIC29.33■■■□□ 2.29
COL15A1P39059 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
COL15A1P39059 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC29.33■■■□□ 2.29
COL15A1P39059 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
COL15A1P39059 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL15A1P39059 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL15A1P39059 RASA4CP-201ENST00000424092 1398 ntBASIC29.32■■■□□ 2.28
COL15A1P39059 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC29.32■■■□□ 2.28
COL15A1P39059 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
COL15A1P39059 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC29.31■■■□□ 2.28
COL15A1P39059 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
COL15A1P39059 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC29.31■■■□□ 2.28
COL15A1P39059 AC097381.1-201ENST00000429019 1296 ntBASIC29.31■■■□□ 2.28
COL15A1P39059 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC29.31■■■□□ 2.28
COL15A1P39059 AC011298.3-201ENST00000615796 283 ntBASIC29.31■■■□□ 2.28
COL15A1P39059 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
COL15A1P39059 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL15A1P39059 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC29.3■■■□□ 2.28
COL15A1P39059 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC29.3■■■□□ 2.28
COL15A1P39059 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC29.3■■■□□ 2.28
COL15A1P39059 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL15A1P39059 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.3■■■□□ 2.28
COL15A1P39059 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
COL15A1P39059 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.29■■■□□ 2.28
COL15A1P39059 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL15A1P39059 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
COL15A1P39059 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.28■■■□□ 2.28
COL15A1P39059 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC29.28■■■□□ 2.28
COL15A1P39059 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
COL15A1P39059 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
COL15A1P39059 AC009102.2-201ENST00000606772 1639 ntBASIC29.28■■■□□ 2.28
COL15A1P39059 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL15A1P39059 AL138724.1-201ENST00000606771 1088 ntBASIC29.27■■■□□ 2.28
COL15A1P39059 AC087623.3-201ENST00000607047 1098 ntBASIC29.27■■■□□ 2.28
COL15A1P39059 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
COL15A1P39059 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
COL15A1P39059 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
COL15A1P39059 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
COL15A1P39059 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
COL15A1P39059 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
COL15A1P39059 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC29.26■■■□□ 2.28
COL15A1P39059 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL15A1P39059 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
COL15A1P39059 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
COL15A1P39059 PLD4-205ENST00000553861 667 ntTSL 2 BASIC29.26■■■□□ 2.27
COL15A1P39059 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.26■■■□□ 2.27
COL15A1P39059 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL15A1P39059 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
COL15A1P39059 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
COL15A1P39059 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL15A1P39059 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COL15A1P39059 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
COL15A1P39059 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
COL15A1P39059 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC29.25■■■□□ 2.27
COL15A1P39059 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL15A1P39059 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL15A1P39059 PARL-206ENST00000435888 1098 ntTSL 5 BASIC29.24■■■□□ 2.27
COL15A1P39059 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
COL15A1P39059 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
COL15A1P39059 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC29.24■■■□□ 2.27
COL15A1P39059 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
COL15A1P39059 C17orf82-201ENST00000623772 1530 ntBASIC29.24■■■□□ 2.27
COL15A1P39059 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
COL15A1P39059 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL15A1P39059 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL15A1P39059 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL15A1P39059 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC29.23■■■□□ 2.27
COL15A1P39059 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC29.23■■■□□ 2.27
COL15A1P39059 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
COL15A1P39059 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
COL15A1P39059 AC099791.1-201ENST00000416440 715 ntBASIC29.22■■■□□ 2.27
COL15A1P39059 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC29.22■■■□□ 2.27
COL15A1P39059 AL162430.1-201ENST00000480705 870 ntBASIC29.22■■■□□ 2.27
COL15A1P39059 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC29.22■■■□□ 2.27
COL15A1P39059 AC008764.7-201ENST00000593779 1081 ntBASIC29.22■■■□□ 2.27
COL15A1P39059 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC29.22■■■□□ 2.27
COL15A1P39059 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC29.22■■■□□ 2.27
COL15A1P39059 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC29.22■■■□□ 2.27
COL15A1P39059 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
COL15A1P39059 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
COL15A1P39059 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.21■■■□□ 2.27
COL15A1P39059 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC29.21■■■□□ 2.27
COL15A1P39059 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
COL15A1P39059 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC29.21■■■□□ 2.27
COL15A1P39059 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL15A1P39059 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.27
COL15A1P39059 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
COL15A1P39059 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.2■■■□□ 2.27
COL15A1P39059 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms