Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh4P39038 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cdh4P39038 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh4P39038 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh4P39038 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh4P39038 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cdh4P39038 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh4P39038 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Cdh4P39038 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Cdh4P39038 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh4P39038 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh4P39038 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh4P39038 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh4P39038 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
Cdh4P39038 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh4P39038 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh4P39038 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh4P39038 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdh4P39038 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh4P39038 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh4P39038 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh4P39038 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh4P39038 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh4P39038 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh4P39038 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Cdh4P39038 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh4P39038 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh4P39038 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.6■□□□□ 0.73
Cdh4P39038 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh4P39038 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh4P39038 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.6■□□□□ 0.73
Cdh4P39038 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh4P39038 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.6■□□□□ 0.73
Cdh4P39038 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.6■□□□□ 0.73
Cdh4P39038 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh4P39038 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh4P39038 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.59■□□□□ 0.73
Cdh4P39038 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdh4P39038 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh4P39038 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.59■□□□□ 0.73
Cdh4P39038 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh4P39038 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh4P39038 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdh4P39038 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh4P39038 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh4P39038 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh4P39038 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh4P39038 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh4P39038 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh4P39038 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
Cdh4P39038 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh4P39038 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh4P39038 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh4P39038 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh4P39038 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdh4P39038 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
Cdh4P39038 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdh4P39038 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdh4P39038 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Cdh4P39038 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh4P39038 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh4P39038 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cdh4P39038 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cdh4P39038 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.56■□□□□ 0.72
Cdh4P39038 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.56■□□□□ 0.72
Cdh4P39038 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cdh4P39038 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh4P39038 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Cdh4P39038 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
Cdh4P39038 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Cdh4P39038 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.55■□□□□ 0.72
Cdh4P39038 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Cdh4P39038 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.55■□□□□ 0.72
Cdh4P39038 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdh4P39038 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdh4P39038 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Cdh4P39038 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.54■□□□□ 0.72
Cdh4P39038 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdh4P39038 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cdh4P39038 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh4P39038 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdh4P39038 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms