Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y1P22090 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.06■□□□□ 0.96
RPS4Y1P22090 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y1P22090 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPS4Y1P22090 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y1P22090 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y1P22090 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.06■□□□□ 0.96
RPS4Y1P22090 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPS4Y1P22090 ALDH1A3-203ENST00000557963 1670 ntBASIC21.05■□□□□ 0.96
RPS4Y1P22090 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4Y1P22090 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4Y1P22090 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RPS4Y1P22090 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4Y1P22090 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPS4Y1P22090 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPS4Y1P22090 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPS4Y1P22090 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4Y1P22090 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4Y1P22090 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4Y1P22090 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RPS4Y1P22090 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4Y1P22090 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPS4Y1P22090 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4Y1P22090 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4Y1P22090 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 AC103724.3-201ENST00000564481 992 ntBASIC21.03■□□□□ 0.96
RPS4Y1P22090 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4Y1P22090 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4Y1P22090 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4Y1P22090 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPS4Y1P22090 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.03■□□□□ 0.96
RPS4Y1P22090 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS4Y1P22090 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4Y1P22090 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4Y1P22090 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPS4Y1P22090 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS4Y1P22090 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.02■□□□□ 0.96
RPS4Y1P22090 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4Y1P22090 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4Y1P22090 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4Y1P22090 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.02■□□□□ 0.96
RPS4Y1P22090 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPS4Y1P22090 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.01■□□□□ 0.95
RPS4Y1P22090 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPS4Y1P22090 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPS4Y1P22090 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS4Y1P22090 NFE2L3P1-201ENST00000588207 1959 ntBASIC21■□□□□ 0.95
RPS4Y1P22090 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21■□□□□ 0.95
RPS4Y1P22090 AC004448.1-201ENST00000458332 883 ntBASIC21■□□□□ 0.95
RPS4Y1P22090 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPS4Y1P22090 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPS4Y1P22090 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4Y1P22090 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4Y1P22090 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4Y1P22090 KRT8P33-201ENST00000508125 1423 ntBASIC20.99■□□□□ 0.95
RPS4Y1P22090 YBX1P4-201ENST00000392794 808 ntBASIC20.99■□□□□ 0.95
RPS4Y1P22090 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4Y1P22090 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RPS4Y1P22090 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4Y1P22090 ANOS2P-203ENST00000472227 1816 ntBASIC20.99■□□□□ 0.95
RPS4Y1P22090 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.99■□□□□ 0.95
RPS4Y1P22090 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPS4Y1P22090 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.98■□□□□ 0.95
RPS4Y1P22090 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.98■□□□□ 0.95
RPS4Y1P22090 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 AC092068.2-201ENST00000590491 1708 ntBASIC20.98■□□□□ 0.95
RPS4Y1P22090 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.98■□□□□ 0.95
RPS4Y1P22090 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPS4Y1P22090 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPS4Y1P22090 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPS4Y1P22090 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.97■□□□□ 0.95
RPS4Y1P22090 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms