Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Hoxb9P20615 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxb9P20615 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.79■□□□□ 0.76
Hoxb9P20615 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.79■□□□□ 0.76
Hoxb9P20615 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxb9P20615 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Hoxb9P20615 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxb9P20615 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.78■□□□□ 0.76
Hoxb9P20615 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb9P20615 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb9P20615 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Hoxb9P20615 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb9P20615 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb9P20615 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxb9P20615 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb9P20615 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb9P20615 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxb9P20615 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb9P20615 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb9P20615 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.77■□□□□ 0.76
Hoxb9P20615 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb9P20615 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxb9P20615 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxb9P20615 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxb9P20615 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxb9P20615 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb9P20615 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb9P20615 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Hoxb9P20615 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Hoxb9P20615 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb9P20615 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb9P20615 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb9P20615 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxb9P20615 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb9P20615 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb9P20615 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb9P20615 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb9P20615 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb9P20615 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.74■□□□□ 0.75
Hoxb9P20615 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb9P20615 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb9P20615 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb9P20615 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb9P20615 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb9P20615 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb9P20615 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Hoxb9P20615 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb9P20615 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.73■□□□□ 0.75
Hoxb9P20615 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb9P20615 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb9P20615 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb9P20615 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb9P20615 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb9P20615 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb9P20615 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hoxb9P20615 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Hoxb9P20615 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
Hoxb9P20615 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Hoxb9P20615 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb9P20615 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxb9P20615 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Hoxb9P20615 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.7■□□□□ 0.74
Hoxb9P20615 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb9P20615 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxb9P20615 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.69■□□□□ 0.74
Hoxb9P20615 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb9P20615 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxb9P20615 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxb9P20615 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb9P20615 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb9P20615 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Hoxb9P20615 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb9P20615 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms