Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 AC009831.1-201ENST00000580420 1582 ntBASIC21.99■■□□□ 1.11
LINGO3P0C6S8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
LINGO3P0C6S8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LINGO3P0C6S8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LINGO3P0C6S8 ABHD17AP5-201ENST00000580133 923 ntBASIC21.98■■□□□ 1.11
LINGO3P0C6S8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LINGO3P0C6S8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LINGO3P0C6S8 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.98■■□□□ 1.11
LINGO3P0C6S8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 AC141586.4-201ENST00000624558 1573 ntBASIC21.97■■□□□ 1.11
LINGO3P0C6S8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LINGO3P0C6S8 AC127496.7-201ENST00000625110 1798 ntBASIC21.97■■□□□ 1.11
LINGO3P0C6S8 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 AC133552.2-201ENST00000619106 1032 ntBASIC21.96■■□□□ 1.11
LINGO3P0C6S8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LINGO3P0C6S8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
LINGO3P0C6S8 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
LINGO3P0C6S8 FOXO3B-201ENST00000395675 1928 ntBASIC21.94■■□□□ 1.1
LINGO3P0C6S8 AC004812.2-201ENST00000611079 2094 ntBASIC21.94■■□□□ 1.1
LINGO3P0C6S8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 U85056.1-201ENST00000616429 682 ntBASIC21.94■■□□□ 1.1
LINGO3P0C6S8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LINGO3P0C6S8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
LINGO3P0C6S8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LINGO3P0C6S8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 AC092667.1-201ENST00000434301 2586 ntBASIC21.91■■□□□ 1.1
LINGO3P0C6S8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LINGO3P0C6S8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 AC073130.3-201ENST00000624389 2278 ntBASIC21.9■■□□□ 1.1
LINGO3P0C6S8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LINGO3P0C6S8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LINGO3P0C6S8 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINGO3P0C6S8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LINGO3P0C6S8 AL592293.1-201ENST00000502889 1188 ntBASIC21.89■■□□□ 1.09
LINGO3P0C6S8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms