Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.42■■□□□ 1.34
MT-CO1P00395 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.42■■□□□ 1.34
MT-CO1P00395 AL117332.1-201ENST00000622628 974 ntBASIC23.42■■□□□ 1.34
MT-CO1P00395 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
MT-CO1P00395 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
MT-CO1P00395 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
MT-CO1P00395 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
MT-CO1P00395 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
MT-CO1P00395 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.42■■□□□ 1.34
MT-CO1P00395 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MT-CO1P00395 AL022069.1-201ENST00000568025 1636 ntBASIC23.41■■□□□ 1.34
MT-CO1P00395 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
MT-CO1P00395 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
MT-CO1P00395 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
MT-CO1P00395 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.41■■□□□ 1.34
MT-CO1P00395 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
MT-CO1P00395 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
MT-CO1P00395 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.41■■□□□ 1.34
MT-CO1P00395 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.4■■□□□ 1.34
MT-CO1P00395 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.4■■□□□ 1.34
MT-CO1P00395 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-CO1P00395 MIR3621-201ENST00000580529 85 ntBASIC23.4■■□□□ 1.34
MT-CO1P00395 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
MT-CO1P00395 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MT-CO1P00395 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
MT-CO1P00395 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
MT-CO1P00395 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.39■■□□□ 1.34
MT-CO1P00395 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.39■■□□□ 1.33
MT-CO1P00395 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-CO1P00395 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.39■■□□□ 1.33
MT-CO1P00395 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.39■■□□□ 1.33
MT-CO1P00395 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.39■■□□□ 1.33
MT-CO1P00395 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.39■■□□□ 1.33
MT-CO1P00395 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.39■■□□□ 1.33
MT-CO1P00395 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.39■■□□□ 1.33
MT-CO1P00395 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-CO1P00395 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
MT-CO1P00395 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
MT-CO1P00395 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
MT-CO1P00395 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
MT-CO1P00395 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
MT-CO1P00395 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.38■■□□□ 1.33
MT-CO1P00395 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.38■■□□□ 1.33
MT-CO1P00395 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.37■■□□□ 1.33
MT-CO1P00395 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-CO1P00395 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.37■■□□□ 1.33
MT-CO1P00395 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.37■■□□□ 1.33
MT-CO1P00395 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.37■■□□□ 1.33
MT-CO1P00395 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
MT-CO1P00395 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
MT-CO1P00395 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.36■■□□□ 1.33
MT-CO1P00395 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
MT-CO1P00395 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.36■■□□□ 1.33
MT-CO1P00395 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.36■■□□□ 1.33
MT-CO1P00395 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
MT-CO1P00395 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
MT-CO1P00395 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.35■■□□□ 1.33
MT-CO1P00395 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.35■■□□□ 1.33
MT-CO1P00395 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.35■■□□□ 1.33
MT-CO1P00395 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.35■■□□□ 1.33
MT-CO1P00395 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.35■■□□□ 1.33
MT-CO1P00395 AL356740.2-201ENST00000601559 647 ntBASIC23.35■■□□□ 1.33
MT-CO1P00395 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.35■■□□□ 1.33
MT-CO1P00395 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
MT-CO1P00395 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
MT-CO1P00395 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.35■■□□□ 1.33
MT-CO1P00395 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
MT-CO1P00395 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
MT-CO1P00395 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MT-CO1P00395 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
MT-CO1P00395 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
MT-CO1P00395 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-CO1P00395 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-CO1P00395 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MT-CO1P00395 AC008406.3-201ENST00000620001 1374 ntBASIC23.33■■□□□ 1.33
MT-CO1P00395 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MT-CO1P00395 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-CO1P00395 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
MT-CO1P00395 AC131281.2-201ENST00000520478 145 ntBASIC23.33■■□□□ 1.33
MT-CO1P00395 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-CO1P00395 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.33■■□□□ 1.33
MT-CO1P00395 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
MT-CO1P00395 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.32■■□□□ 1.32
MT-CO1P00395 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.32■■□□□ 1.32
MT-CO1P00395 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.32■■□□□ 1.32
MT-CO1P00395 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.32■■□□□ 1.32
MT-CO1P00395 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms