Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnmt3aO88508 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnmt3aO88508 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnmt3aO88508 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Dnmt3aO88508 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Dnmt3aO88508 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnmt3aO88508 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dnmt3aO88508 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.55■□□□□ 0.88
Dnmt3aO88508 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnmt3aO88508 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnmt3aO88508 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dnmt3aO88508 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.54■□□□□ 0.88
Dnmt3aO88508 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnmt3aO88508 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.53■□□□□ 0.88
Dnmt3aO88508 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.53■□□□□ 0.88
Dnmt3aO88508 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Gm22238-201ENSMUST00000175222 88 ntBASIC20.52■□□□□ 0.88
Dnmt3aO88508 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.52■□□□□ 0.88
Dnmt3aO88508 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
Dnmt3aO88508 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Dnmt3aO88508 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Dnmt3aO88508 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnmt3aO88508 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dnmt3aO88508 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.5■□□□□ 0.87
Dnmt3aO88508 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.5■□□□□ 0.87
Dnmt3aO88508 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnmt3aO88508 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Dnmt3aO88508 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Dnmt3aO88508 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnmt3aO88508 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnmt3aO88508 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Dnmt3aO88508 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dnmt3aO88508 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dnmt3aO88508 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Dnmt3aO88508 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Dnmt3aO88508 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dnmt3aO88508 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Dnmt3aO88508 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dnmt3aO88508 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dnmt3aO88508 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Dnmt3aO88508 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
Dnmt3aO88508 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dnmt3aO88508 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dnmt3aO88508 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Dnmt3aO88508 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.46■□□□□ 0.87
Dnmt3aO88508 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Dnmt3aO88508 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Dnmt3aO88508 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Dnmt3aO88508 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms